The identity, distribution, and impacts of non-native apple snails in the continental United States

<p>Abstract</p> <p>Background</p> <p>Since the mid 1990s populations of non-native apple snails (Ampullariidae) have been discovered with increasing frequency in the continental United States. Given the dramatic effects that introduced apple snails have had on both natural habitats and agricultural areas in Southeast Asia, their introduction to the mainland U.S. is cause for concern. We combine phylogenetic analyses of mtDNA sequences with examination of introduced populations and museum collections to clarify the identities, introduced distributions, geographical origins, and introduction histories of apple snails.</p> <p>Results</p> <p>Based on sampling to date, we conclude there are five species of non-native apple snails in the continental U.S. Most significantly, we recognize three species within what has been called the channeled apple snail: <it>Pomacea canaliculata </it>(California and Arizona), <it>Pomacea insularum</it>, (Florida, Texas, and Georgia) and <it>Pomacea haustrum </it>(Florida). The first established populations of <it>P. haustrum </it>were discovered in the late 1970s in Palm Beach County Florida, and have not spread appreciably in 30 years. In contrast, populations of <it>P. insularum </it>were established in Texas by 1989, in Florida by the mid to late 1990s, and in Georgia by 2005, and this species continues to spread rapidly. Most introduced <it>P. insularum </it>haplotypes are a close match to haplotypes from the Río Uruguay near Buenos Aires, indicating cold tolerance, with the potential to spread from Florida, Georgia, and Texas through Louisiana, Alabama, Mississippi, and South Carolina. <it>Pomacea canaliculata </it>populations were first discovered in California in 1997. Haplotypes of introduced <it>P. canaliculata </it>match native-range haplotypes from near Buenos Aires, Argentina, also indicating cold tolerance and the potential to establish farther north.</p> <p>Conclusion</p> <p>The term "channeled apple snail" is descriptive of a morphology found in many apple snail species. It does not identify a single species or a monophyletic group. Clarifying species identifications permits a more accurate assessment of introduction histories and distributions, and provides a very different picture of the tempo and pattern of invasions than was inferred when the three species with channeled sutures were considered one. Matching introduced and native-range haplotypes suggests the potential for range expansion, with implications for native aquatic ecosystems and species, agriculture, and human health.</p

A novel and enigmatic two-holed shell aperture in a new species of suspension-feeding worm-snail (Vermetidae)

Shell aperture modifications are well known in terrestrial and aquatic gastropods, with apertural lip thickening and tooth development common in species with terminal (determinate) shell growth. In contrast, secondary shell openings are rare in snails and are largely limited to slit shells, keyhole limpets, and abalone of the Vetigastropoda. When such features occur in other groups, they are noteworthy and raise interesting questions concerning the functional/adaptive significance of these shell modifications. Here we report on one such modification in a newly described species of vermetid snail. Members of the worm-snail family Vermetidae are sessile, suspension-feeding caenogastropods found in warm temperate to tropical marine environments worldwide. As juveniles, vermetids permanently cement their shells to hard substrata and subsequently produce irregularly coiled polychaete-like shell tubes with indeterminate growth and typically a simple circular shell aperture. In one previously studied group (genus Cupolaconcha), the aperture can be covered by a shell dome with a central slit that retains its widest opening in the center of the aperture. Vermetid specimens collected in the barrier reefs of Belize and the Florida Keys show an extreme aperture modification previously unknown in Gastropoda, in which the shell opening is covered by an apertural dome that leaves two equal-sized circular holes, each corresponding to the inflow and outflow water exchange currents of the animal’s mantle cavity. The function of this perforated apertural dome is unknown, and it is in some ways antithetical to the suspension feeding habit of these snails. Further field and laboratory-based studies will be needed to clarify the functional significance and trade-offs of this unique morphology. The new taxon, which is not closely related to the previously described dome-building clade Cupolaconcha, is described and named as Vermetus biperforatus Bieler, Collins, Golding & Rawlings n. sp

A population of high-redshift type-2 quasars-II. Radio Properties

We present multi-frequency radio observations of a sample of z~2 obscured (type-2) quasars in the Spitzer extragalactic First Look Survey area. We combine the public data at 1.4 GHz, used in the selection of these sources, with new observations at 610 MHz (GMRT) and at 4.9 GHz (VLA). We find the sample includes sources with steep, flat and gigahertz-peaked spectra. There are no strong correlations between the presence or absence of emission lines in the optical spectra and the radio spectral properties of the sample. However, there are no secure flat-spectrum type-2 quasars with narrow emission lines which would be problematic for unified schemes. Most of the population have straight radio spectra with spectral index alpha~1 as is expected for developed, potentially FRI-like, jets in which continous injection of relativistic electrons is accompanied by inverse-Compton losses against the cosmic microwave background.Comment: 6 pages, 2 colour figures, submitted to MNRA

Classifying organisms and artefacts by their outline shapes

We often wish to classify objects by their shapes. Indeed, the study of shapes is an important part of many scientific fields, such as evolutionary biology, structural biology, image processing and archaeology. However, mathematical shape spaces are rather complicated and nonlinear. The most widely used methods of shape analysis, geometric morphometrics, treat the shapes as sets of points. Diffeomorphic methods consider the underlying curve rather than points, but have rarely been applied to real-world problems. Using a machine classifier, we tested the ability of several of these methods to describe and classify the shapes of a variety of organic and man-made objects. We find that one method, based on square-root velocity functions (SRVFs), outperforms all others, including a standard geometric morphometric method (eigenshapes), and that it is also superior to human experts using shape alone. When the SRVF approach is constrained to take account of homologous landmarks it can accurately classify objects of very different shapes. The SRVF method identifies a shortest path between shapes, and we show that this can be used to estimate the shapes of intermediate steps in evolutionary series. Diffeomorphic shape analysis methods, we conclude, now provide practical and effective solutions to many shape description and classification problems in the natural and human sciences.</p

Evolution of the Most Massive Galaxies to z ~ 0.6: II. The link between radio AGN activity and star formation

We analyze the optical spectra of massive (log M*/Msun > 11.4) radio-loud galaxies at z~0.2 and z~0.6. By comparing stellar population parameters of these radio-loud samples with radio-quiet control samples, we investigate how the presence of a radio-emitting jet relates to the recent star formation history of the host galaxy. We also investigate how the emission-line properties of the radio galaxies evolve with redshift by stacking their spectra. Our main results are the following. (1) Both at low and at high redshift, half as many radio-loud as radio-quiet galaxies have experienced significant star formation in the past Gyr. (2) The Balmer absorption line properties of massive galaxies that have experienced recent star formation show that star formation occurred as a burst in many of these systems. (3) Both the radio and the emission-line luminosity of radio AGN evolve significantly with redshift. However, radio galaxies with similar stellar population parameters, have similar emission-line properties both at high- and at low-redshift. These results suggest that massive galaxies experience cyclical episodes of gas accretion, star formation and black hole growth, followed by the production of a radio jet that shuts down further activity. The behaviour of galaxies with log M*/Msun > 11.4 is the same at z = 0.6 as it is at z = 0.2, except that higher redshift galaxies experience more star formation and black hole growth and produce more luminous radio jets during each accretion cycle.Comment: 14 pages, 12 figures, submitted to MNRA

The MALATANG Survey : The L GAS-L IR Correlation on Sub-kiloparsec Scale in Six Nearby Star-forming Galaxies as Traced by HCN J = 4 → 3 and HCO + J = 4 → 3

This is an author-created, un-copyedited version of an article published in The Astrophysical Journal. The Version of Record is available online at https://doi.org/10.3847/1538-4357/aac512.We present HCN J = 4→3 and HCO+ J = 4→3 maps of six nearby star-forming galaxies, NGC 253, NGC 1068, IC 342, M82, M83, and NGC 6946, obtained with the James Clerk Maxwell Telescope as part of the MALATANG survey. All galaxies were mapped in the central 2×2 region at 14 (FWHM) resolution (corresponding to linear scales of ∼0.2-1.0 kpc). The LIR-Ldense relation, where the dense gas is traced by the HCN J = 4→3 and the HCO+ J = 4→3 emission, measured in our sample of spatially resolved galaxies is found to follow the linear correlation established globally in galaxies within the scatter. We find that the luminosity ratio, LIR/Ldense, shows systematic variations with LIR within individual spatially resolved galaxies, whereas the galaxy-integrated ratios vary little. A rising trend is also found between LIR/Ldense ratio and the warm-dust temperature gauged by the 70 μm/100 μm flux ratio. We find that the luminosity ratios of IR/HCN (4-3) and IR/HCO+ (4-3), which can be taken as a proxy for the star formation efficiency (SFE) in the dense molecular gas (SFE dense), appear to be nearly independent of the dense gas fraction ( f dense) for our sample of galaxies. The SFE of the total molecular gas (SFEmol) is found to increase substantially with f dense when combining our data with those on local (ultra)luminous infrared galaxies and high-z quasars. The mean LHCN(4-3) LHCO+(4-3) line ratio measured for the six targeted galaxies is 0.9±0.6. No significant correlation is found for the L'HCN(4-3) L'HCO+(4-3) ratio with the star formation rate as traced by L IR, nor with the warm-dust temperature, for the different populations of galaxies.Peer reviewe

The MALATANG Survey : Dense Gas and Star Formation from High Transition HCN and HCO+ maps of NGC253

This article has been accepted for publication in Monthly Notices of the Royal Astronomical Society. © 2020 The Author(s). Published by Oxford University Press on behalf of the Royal Astronomical Society. All rights reserved.To study the high-transition dense-gas tracers and their relationships to the star formation of the inner $\sim$ 2 kpc circumnuclear region of NGC253, we present HCN $J=4-3$ and HCO$^+ J=4-3$ maps obtained with the James Clerk Maxwell Telescope (JCMT). With the spatially resolved data, we compute the concentration indices $r_{90}/r_{50}$ for the different tracers. HCN and HCO$^+$ 4-3 emission features tend to be centrally concentrated, which is in contrast to the shallower distribution of CO 1-0 and the stellar component. The dense-gas fraction ($f_\text{dense}$, traced by the velocity-integrated-intensity ratios of HCN/CO and HCO$^+$/CO) and the ratio $R_\text{31}$ (CO 3-2/1-0) decline towards larger galactocentric distances, but increase with higher SFR surface density. The radial variation and the large scatter of $f_\text{dense}$ and $R_\text{31}$ imply distinct physical conditions in different regions of the galactic disc. The relationships of $f_\text{dense}$ versus $\Sigma_\text{stellar}$, and SFE$_\text{dense}$ versus $\Sigma_\text{stellar}$ are explored. SFE$_\text{dense}$ increases with higher $\Sigma_\text{stellar}$ in this galaxy, which is inconsistent with previous work that used HCN 1-0 data. This implies that existing stellar components might have different effects on the high-$J$ HCN and HCO$^+$ than their low-$J$ emission. We also find that SFE$_\text{dense}$ seems to be decreasing with higher $f_\text{dense}$, which is consistent with previous works, and it suggests that the ability of the dense gas to form stars diminishes when the average density of the gas increases. This is expected in a scenario where only the regions with high-density contrast collapse and form stars.Peer reviewe

Expansion and functional diversification of a leucyl aminopeptidase family that encodes the major protein constituents of Drosophila sperm

<p>Abstract</p> <p>Background</p> <p>The evolutionary diversification of gene families through gene creation (and loss) is a dynamic process believed to be critical to the evolution of functional novelty. Previous identification of a closely related family of eight annotated metalloprotease genes of the M17 Merops family in the <it>Drosophila </it>sperm proteome (termed, Sperm-LeucylAminoPeptidases, S-LAPs 1-8) led us to hypothesize that this gene family may have experienced such a diversification during insect evolution.</p> <p>Results</p> <p>To assess putative functional activities of S-LAPs, we (i) demonstrated that all S-LAPs are specifically expressed in the testis, (ii) confirmed their presence in sperm by two-dimensional gel electrophoresis and mass spectrometry, (iii) determined that they represent a major portion of the total protein in sperm and (iv) identified aminopeptidase enzymatic activity in sperm extracts using LAP-specific substrates. Functionally significant divergence at the canonical M17 active site indicates that the largest phylogenetic group of S-LAPs lost catalytic activity and likely acquired novel, as yet undetermined, functions in sperm prior to the expansion of the gene family.</p> <p>Conclusions</p> <p>Comparative genomic and phylogenetic analyses revealed the dramatic expansion of the S-LAP gene family during <it>Drosophila </it>evolution and copy number heterogeneity in the genomes of related insects. This finding, in conjunction with the loss of catalytic activity and potential neofunctionalization amongst some family members, extends empirical support for pervasive "revolving door" turnover in the evolution of reproductive gene family composition and function.</p

Computational Identification of Uncharacterized Cruzain Binding Sites

Chagas disease, caused by the unicellular parasite Trypanosoma cruzi, claims 50,000 lives annually and is the leading cause of infectious myocarditis in the world. As current antichagastic therapies like nifurtimox and benznidazole are highly toxic, ineffective at parasite eradication, and subject to increasing resistance, novel therapeutics are urgently needed. Cruzain, the major cysteine protease of Trypanosoma cruzi, is one attractive drug target. In the current work, molecular dynamics simulations and a sequence alignment of a non-redundant, unbiased set of peptidase C1 family members are used to identify uncharacterized cruzain binding sites. The two sites identified may serve as targets for future pharmacological intervention

The James Webb Space Telescope Mission

Twenty-six years ago a small committee report, building on earlier studies, expounded a compelling and poetic vision for the future of astronomy, calling for an infrared-optimized space telescope with an aperture of at least $4m$. With the support of their governments in the US, Europe, and Canada, 20,000 people realized that vision as the $6.5m$ James Webb Space Telescope. A generation of astronomers will celebrate their accomplishments for the life of the mission, potentially as long as 20 years, and beyond. This report and the scientific discoveries that follow are extended thank-you notes to the 20,000 team members. The telescope is working perfectly, with much better image quality than expected. In this and accompanying papers, we give a brief history, describe the observatory, outline its objectives and current observing program, and discuss the inventions and people who made it possible. We cite detailed reports on the design and the measured performance on orbit.Comment: Accepted by PASP for the special issue on The James Webb Space Telescope Overview, 29 pages, 4 figure